Phylogenetic tree (newick) viewer

This is an online tool for phylogenetic tree view (newick format) that allows multiple sequence alignments to be shown together with the trees (fasta format). It uses the tree drawing engine implemented in the ETE toolkit, and offers transparent integration with the NCBI taxonomy database. Currently, alignments can be displayed in condensed or block-based format. Leaf names in the newick tree should match those in the fasta alignment.

When pressing "View Tree", a permanent link to your data will also be provided. You can use the link for sharing your images.

Tip: Use NCBI numeric taxids as leaf names (or in the format TaxID.sequenceName) to get on-the-fly translation of species names and lineages.

Paste your tree in newick format:

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Clear
Or upload a newick file:

Paste your alignment in fasta format:

>420890.LCGL_0792/1-8
MLELNLQL
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MLELNLQL
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MLELNLQL
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LMKMNLQF
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LMKMNLQF
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LLTMNLQL
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LLTMNLQL
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LLNMNLQL
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LLSMNLQL
>1040964.LRU_00397/1-5
---MNLQF
>362948.LSL_0954/1-7
-MLMNLQF
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MNLANLQL
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MTLNNLQL
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MLKLNLQL
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MNLANLQF
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LNLANLQF
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KTLENLQL
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KTLENLQL
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KTLENLQL
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KTLENLQL
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LNLSNLQY
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LNLSNLQH
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MNLANLQL
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MNLANLQL
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LNLSNLQH
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MNLANLQL
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MNLANLQL
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MNLANLQL
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MNLANLQL
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LNLENLQL
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MNLANLQL
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MNLANLQL
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MNLANLQL
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MNLANLQL
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MNLANLQL
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MNLANLQL
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MNLANLQL
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MNLASLQL
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MNLASLQL
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MNLANLQL
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LNLANLQL
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LNLANLQL
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LNLANLQL
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MNLANLQL
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MNLANLQL
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MNLANLQL
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-----MQL
>171101.spr1014/1-3
-----MQL
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MTLNNLQL
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MTLNNLQL
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MTLNNLQL
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MTLNNLQL
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MTLNNLQL
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MTLNNLQL
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MTLNNLQL
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MTLNNLQL
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MTLNNLQL
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MTLNNLQL
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MTLNNLQL
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MTLNNLQL
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MTLNNLQL
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MTLNNLQL
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MTLNNLQL
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MTLNNLQL
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MTLNNLQL
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MTLNNLQL
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MTLNNLQL
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MTLNNLQL
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MTLSNLQL
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---VNLQL
>693746.OBV_11340/1-5
---IGLQF
>663278.Ethha_1647/1-7
-WMREVNS
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-MLKNIQL
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-MLRSMQF
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-MLINLQL
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-MLINLQL
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-MLINLQL
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--MMNLQL
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-MIKNLQL
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-MIKNLQL
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MLKWDLQL
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MLKLDLQL
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KLTLDLQL
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KLTLDLQL
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MLKLDLQL
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MLKLDLQL
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MIKDNLQL
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MLRINLQL
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---MNLQL
>272563.CD1163/1-8
MLNMNLQL
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---MNLQL
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MLKMNLQL
>596329.HMPREF0631_1695/1-8
MLKMNLQL
>555079.Toce_0765/1-5
---MNLQL
>499229.TepRe1_1515/1-5
---MNLQL
>335541.Swol_1611/1-7
-MFTDLQL
>264732.Moth_0559/1-6
--MFDLQL
>580327.Tthe_1140/1-4
----RLQL
>858215.Thexy_1560/1-4
----KLQL
>273068.TTE0915/1-4
----ILQL
>697303.Thewi_1004/1-4
----KLQL
>340099.Teth39_1433/1-4
----KLQL
>580331.Thit_0853/1-4
----KLQL
>411465.PEPMIC_00346/1-7
-MLKNLQL
>767100.HMPREF9126_0908/1-7
-MLKNLQL
>866775.HMPREF9243_1206/1-8
MLKLDLQF
>945021.TEH_07270/1-8
LMIMNLQL
>908337.HMPREF9257_1320/1-8
MLKLNLQL
>638301.HMPREF0444_1100/1-8
MLKVNLQL
>626369.HMPREF0446_01584/1-8
MLKVNLQL
>655812.HMPREF0061_0093/1-8
MLKFNLQF
>333990.CAT7_03724/1-8
MLKMNLQF
>208596.CAR_c08530/1-8
MLKMNLQF
>546270.GEMHA0001_0248/1-8
MLQLNLQF
>562981.HMPREF0428_00540/1-8
MLQLNLQF
>562982.HMPREF0432_00497/1-8
MLKLNLQF
>562983.HMPREF0433_00085/1-8
MLKLNLQF
>221109.OB2044/1-8
MLRLDLQF
>545693.BMQ_4659/1-8
LVRLDLQF
>933115.GPDM_11590/1-8
MLRLDLQF
>279010.BL01160/1-8
MLRLDLQF
>279010.BLi02921/1-8
MLRLDLQF
>981383.OTW25_010100018928/1-8
MLRLDLQF
>224308.Bsubs1_010100015276/1-8
MLRLDLQF
>326423.RBAM_024990/1-8
MLRLDLQF
>315750.BPUM_2434/1-8
MLRLDLQF
>720555.BATR1942_11735/1-8
MLRLDLQF
>568703.LRHM_1624/1-8
MLKMNLQF
>568703.LGG_01688/1-8
MLKMNLQF
>543734.LCABL_18600/1-8
MLKMNLQF
>626523.GCWU000342_01172/1-7
-MLENLQF
>657318.EUR_12700/1-7
-MLNNLQF
>1042156.CXIVA_22710/1-7
-MMNNLQF
>702450.CUW_1067/1-8
MLKLNLQL
>1027396.LMOSA_24620/1-8
MLKFDIQH
>702453.NT03LS_1829/1-8
MLKFDIQH
>386043.lwe1553/1-8
MLKFDIQH
>169963.lmo1540/1-8
MLKFDIQH
>272626.lin1575/1-8
MLKFDIQH
>881621.LIV_1496/1-8
MLKFDIQH
>525367.HMPREF0556_12251/1-8
MLKFDIQH
>545696.HOLDEFILI_03373/1-8
KLVLNIQL
>272558.BH3009/1-8
MLKMNLQF
>398511.BpOF4_02725/1-8
MLKMNLQF
>66692.ABC2600/1-8
MLKMDLQF
>342451.SSP1114/1-8
MLKLNLQF
>698737.SLGD_01276/1-8
MLKLNLQF
>396513.Sca_1256/1-8
MLKLNLQF
>984892.SPSE_1147/1-8
MLKLNLQF
>435837.HMPREF0798_00155/1-8
MLKLNLQF
>176279.SERP1209/1-8
MLKLNLQF
>435838.HMPREF0786_00718/1-8
MLKLNLQF
>525378.HMPREF0793_2387/1-8
MLKLNLQF
>176280.SE1328/1-8
MLKLNLQF
>985002.SAMSHR1132_14810/1-8
MLKLNLQF
>93062.SACOL1700/1-8
MLKLNLQF
>93061.SAOUHSC_01755/1-8
MLKLNLQF
>158878.SAV1645/1-8
MLKLNLQF
>279808.SH1275/1-8
MLKLNLQF
>596319.STAWA0001_0724/1-8
MLKLNLQF
>360911.EAT1b_2680/1-8
MLQLNLQF
>262543.Exig_2107/1-8
MLKLNLQF
>491915.Aflv_0696/1-8
MLRLDLQF
>235909.GK2608/1-8
MLRLDLQF
>420246.GTNG_2538/1-8
MLRLDLQF
>634956.Geoth_1032/1-8
MLRLDLQF
>471223.GWCH70_2540/1-8
MLRLDLQF
>439292.Bsel_1464/1-8
FLKLDLQY
>1027292.HMPREF9372_2813/1-8
MLRLDLQF
>345219.Bcoa_2651/1-8
MLKLDLQF
>714961.BFZC1_06448/1-8
LLALDLQL
>444177.Bsph_3948/1-8
LLALDLQL
>665959.HMPREF1013_02450/1-8
LLKLDLQL
>649639.Bcell_3025/1-8
FLKLDLQF
>313627.B14911_06431/1-8
MLRLDLQF
>441769.Bcoam_010100014199/1-8
MLRLDLQF
>406124.Bm3-1_010100013236/1-8
MLRLDLQF
>315749.Bcer98_3157/1-8
MLRLDLQF
>198094.BA_4674/1-8
MLRLDLQF
>226900.BC4436/1-8
MLRLDLQF
>592010.GCWU000182_00243/1-7
-MLRNLQF
>420336.Epulo_010100003722/1-7
-MIRDLQF
>457421.CBFG_05458/1-7
-MLKNLQL
>411902.CLOBOL_03836/1-7
-MLKNLQL
>610130.Closa_2002/1-7
-MLRNLQF
>245014.CK3_27030/1-7
-MFKNLQL
>887325.HMPREF0381_1836/1-7
-MFKNLQL
>575593.HMPREF0491_00578/1-7
-MFKNLQL
>717608.CLS_25820/1-7
-MFKNLQL
>742740.HMPREF9474_03958/1-7
-MFKNLQL
>515620.EUBELI_01015/1-4
----NLQL
>483218.BACPEC_00347/1-7
-MLENLQF
>476272.RUMHYD_00447/1-7
-MMKNLQL
>457412.RSAG_00099/1-7
-MMKNLQL
>657314.CK5_26470/1-7
-MMKNLQL
>657323.CK1_11140/1-7
-MMKNLQL
>411459.RUMOBE_01692/1-7
-MMKNLQL
>642492.Clole_2109/1-7
-MLRDLQF
>633697.EubceDRAFT_0058/1-7
-MMKNLQF
>478749.BRYFOR_09583/1-7
-MLNNLQI
>657324.CIY_18810/1-7
-MLQNLQF
>357809.Cphy_2549/1-7
-MLKNLQF
>658086.HMPREF0994_02823/1-7
-MLKNLQF
>511680.BUTYVIB_00145/1-7
-MLKNLQF
>411474.COPEUT_00210/1-7
-MMKELQF
>411489.CLOL250_00203/1-7
-MMKELQF
>658655.HMPREF0988_00308/1-7
-MMNNLQF
>411470.RUMGNA_01931/1-7
-MMKNLQY
>556261.HMPREF0240_02959/1-7
-MMKNLQY
>717962.CC1_18970/1-7
-MLTNLQF
>553973.CLOHYLEM_04078/1-7
-MMKNLQF
>411461.DORFOR_01568/1-7
-MMNNLQF
>411462.DORLON_00526/1-7
-MMKNLQF
>657313.RTO_21210/1-7
-MMKNLQF
>411460.RUMTOR_01086/1-7
-MMKNLQF
>742723.HMPREF9477_00589/1-7
-MMKNLQF
>411468.CLOSCI_00485/1-7
-MMKNLQF
>658088.HMPREF0987_00147/1-7
-MMKNLQF
>470146.COPCOM_02870/1-7
-MMKNLQF
>471875.RUMLAC_00437/1-7
-MMKNLQF
>515622.bpr_I1441/1-7
-MMNNLQF
>718255.RO1_14250/1-7
-MLNNLQF
>622312.ROSEINA2194_03722/1-7
-MMNNLQF
>585394.RHOM_07545/1-7
-MMNNLQF
>411463.EUBVEN_00596/1-7
-MMKNLQF
>537007.BLAHAN_05663/1-7
-MLKNLQL
>245018.CL2_10880/1-7
-MMKNLQF
>411490.ANACAC_01217/1-7
-MMKNLQF
>411469.EUBHAL_00215/1-7
-MMKNLQF
>697329.Rumal_2334/1-7
-MIKSMQF
>657321.RBR_14410/1-7
-MLKNIQL
>212717.CTC02058/1-7
-MLLNLQL
>386415.NT01CX_0079/1-7
-MLLNLQL
>445337.CBC_0366/1-7
-MLLNLQL
>592027.CLG_B0615/1-7
-MLLNLQL
>748727.CLJU_c07380/1-7
-MLINLQL
>573061.Clocel_2750/1-7
-MLKNLQL
>536227.CcarbDRAFT_3898/1-7
-MILNLQL
>632245.CLP_3638/1-7
-MLINLQL
>445335.CBN_3030/1-7
-MLVNLQL
>195103.CPF_2383/1-7
-MLKNLQL
>997346.HMPREF9374_0137/1-8
MLKMNLQF
>986075.CathTA2_2975/1-8
MLKMNLQF
>717606.PaecuDRAFT_3852/1-8
MLKLDLQL
>324057.Pjdr2_4411/1-8
MLKLDLQL
>1036673.KNP414_06437/1-8
MLQLNLQL
>621372.POTG_02461/1-8
MLKLDLQL
>1033810.HLPCO_09948/1-8
KFVLNIQL
>1033810.HLPCO_07794/1-8
KFVLNIQL
>518637.EUBIFOR_00381/1-8
LLKLDLQL
>908340.HMPREF9406_1882/1-8
KFVLDIQL
>658659.HMPREF0983_00920/1-8
KFVLDIQL
>428127.EUBDOL_01314/1-8
KFVLDIQL
>552396.HMPREF0863_00775/1-8
KFVLDIQL
>650150.ERH_0915/1-8
KFVLDIQL
>469596.HMPREF9488_02866/1-8
MFKLDLQL
>445974.CLORAM_01381/1-8
MFKLDLQL
>428126.CLOSPI_00882/1-8
MFKLDLQL
>572544.Ilyop_1389/1-8
LFRLNIQL
>416591.Tlet_1977/1-7
-MRIDIQL
>688269.Theth_1956/1-7
-MRIEIQL
>443254.Marpi_1667/1-7
-MRIDLQL
>381764.Fnod_0436/1-7
-MRINIQL
>391009.Tmel_1034/1-7
-MRIDIQL
>484019.THA_1314/1-7
-MKINIQL
>908338.HMPREF9286_1731/1-5
---FDLLL
>754027.HMPREF9554_00787/1-6
--MYQEAT
>591001.Acfer_0341/1-8
MFELILQL
>626939.HMPREF9443_01074/1-8
MFEIILQL
>469381.Dpep_2144/1-8
RNLLSLQF
>352165.HMPREF7215_0255/1-8
FEKMDLQF
>403833.Pmob_0803/1-7
-MKIDLQL
>722438.MPNE_0380/1-7
-MNIDLQF
>243273.MgenG_010200001597/1-7
-MSINLQF
>859194.MHF_0278/1-5
---FDLQF
>1111676.MHC_01015/1-5
---FDLQF
>272633.MYPE4440/1-8
MLLINLQF
>708616.MGF_3350/1-8
KKILDLQF
>273119.UU210/1-8
NKLTDLQL
>565575.UUR10_0203/1-8
NKLTDLQL
>592028.GCWU000321_00138/1-7
-MLLDLQL
>910314.HMPREF9220_0568/1-7
-MLLDLQL
>37692.ATP_00282/1-8
LLKLNIQL
>262768.PAM_088/1-8
LLQLQIQL
>59748.PAa_0592/1-8
LLKLQIQL
>717960.EC1_11460/1-8
RFTLDIQF
>679192.HMPREF9013_0289/1-8
KFTLDIQF
>706433.HMPREF9430_01607/1-8
KFTLDIQF
>203123.OEOE_0958/1-8
EKLQNLIK
>1045854.WKK_02120/1-8
LNLTNLTM
>585506.HMPREF0877_0288/1-8
LNLNNLTM
>911104.WcibK1_010100005269/1-8
LNLNNLTM
>930946.FfruK3_010100001030/1-8
MNQDNLQL
>907931.LfalK3_010100005993/1-8
LNQENLQM
>762051.LKI_09335/1-8
MNQENLQM
>762550.LEGAS_0845/1-8
MNQENLQM
>927691.LgelK3_010100009514/1-8
MNQENLQM
>203120.LEUM_1325/1-8
MNQENLQM
>886872.LargK3_010100003448/1-8
MNQENLQM
>349519.LCK_01030/1-8
MNQENLQM
>701521.PECL_1067/1-7
-MEMNLQF
>862514.HMPREF0623_0198/1-7
-MEMNLQF
>278197.PEPE_0813/1-7
-MEMNLQF
>525318.HMPREF0497_2614/1-8
MLAMNLQF
>511437.Lbuc_1152/1-8
MLAMNLQF
>714313.LSA_06530/1-8
MLKMNLQF
>941770.LfruK3_010100001370/1-8
MLKMNLQF
>387344.LVIS_0983/1-8
LMNMNLQF
>575594.HMPREF0501_00507/1-7
-MIMDLQF
>349123.Lreu23DRAFT_4043/1-7
-MIMDLQF
>944562.HMPREF9102_0844/1-7
-MIMDLQF
>525309.HMPREF0494_1857/1-7
-MIMDLQF
>525366.HMPREF0549_1701/1-7
-MIMNLQF
>390333.Ldb1430/1-8
NILSNAKL
>585524.HMPREF0493_0381/1-8
MNILGLKL
>1033837.WANG_0376/1-8
MNILGMKL
>748671.LCRIS_01346/1-8
MNILGMKL
>405566.lhv_1423/1-8
MNILGMKL
>525365.HMPREF0548_0815/1-8
MNILGMKL
>891391.LAC30SC_07460/1-8
MNILGMKL
>272621.LBA1337/1-8
MNILGMKL
>713605.LineA_010100005674/1-8
DNLVQLKL
>440497.LBJG_01260/1-8
NNFSTMNL
>257314.LJ1555/1-8
NNLEALKL
>324831.LGAS_0746/1-8
NNLEALKL
>936140.LfarK3_010100009141/1-8
MLKMNLQF
>936140.LfarK3_010100005895/1-8
MLKMNLQF
>314315.LSA0672/1-8
MLQMNLQF
>913848.LcorcK3_010100009169/1-8
MLKMDLQF
>867903.ThesuDRAFT_1675/1-5
---INLQL
>644966.Tmar_2204/1-5
---IHLQL
>457570.Nther_0530/1-5
---MNLQL
>351627.Csac_1570/1-5
---FDIQL
>608506.COB47_1413/1-5
---FDIQL
>521460.Athe_1120/1-5
---FDIQL
>632292.Calhy_1614/1-5
---FDIQL
>632335.Calkr_1101/1-5
---FDIQL
>632518.Calow_0935/1-5
---FDIQL
>1064535.MELS_1486/1-5
---FNLQL
>699218.HMPREF0889_1559/1-5
---FDLQL
>1042163.BRLA_c45430/1-7
-LFTDLQF
>358681.BBR47_18470/1-7
-LFNDLQF
>292459.STH431/1-4
----FLQL
>521098.Aaci_1815/1-8
MLRLDLQR
>1048834.TC41_1910/1-8
MLRLDLQR
>401526.TcarDRAFT_1644/1-8
MFRFNLQR
>864563.HMPREF9166_0426/1-8
LFSFDLQL
>638302.HMPREF0908_0081/1-8
LFSFDLQL
>585503.HMPREF7545_1961/1-8
LFSFDLQL
>888060.HMPREF9081_1416/1-8
LFSFDLQL
>879310.HMPREF9162_1902/1-8
MFSFDLQL
>546271.SELSPUOL_01786/1-8
MFKFDLQL
>500635.MITSMUL_05363/1-8
MFKFELQR
>944564.HMPREF9200_1506/1-5
---IQLQL
>1000569.HMPREF1040_1330/1-5
---FDLQL
>706434.HMPREF9429_01255/1-5
---FDLQL
>265311.Mfl439/1-8
RFILNLQF
>743965.MPUT_0496/1-8
RFLLGLQF
>272632.MSC_0560/1-8
RFLLGLQY
>880447.MSB_A0428/1-8
RFLLGLQY
>138119.DSY3165/1-7
-MLKNLQL
>768706.Desor_5066/1-7
-MLKNLQL
>441768.ACL_0364/1-8
MLKINIQL
>864565.HMPREF0379_0937/1-8
MIKINLQL
>655811.HMPREF0078_0760/1-7
-FLNNLQR
>561177.ANHYDRO_00739/1-7
-FLNNLQR
>525255.HMPREF0077_0300/1-7
-ILNNLQR
>525919.Apre_0928/1-7
-ILNDLQR
>879305.HMPREF9290_1325/1-7
-ILNNLQR
>525254.HMPREF0072_0368/1-7
-ILNNLQR
>574087.Acear_0570/1-8
IKEMNLQL
>1029718.SFBM_0424/1-5
---FDIQL
>1041504.RATSFB_0338/1-5
---FDIQL
>572547.Amico_0844/1-8
INFFDLQF
>580340.Tlie_1003/1-8
MIRFDLQL
>272562.CA_C1259/1-7
-MLSNLSL
>697281.Mahau_1511/1-7
-MWNDLQL
>246199.CUS_5402/1-7
-MIKSMQF
>431943.CKL_0881/1-7
-MIINLQI
>575609.HMPREF0629_01081/1-5
---FNLQL
>862517.HMPREF9225_1926/1-5
---FDLRL
>596330.HMPREF0628_0537/1-8
MIKFNLEL
>334413.FMG_0366/1-7
-MIKDLQL
>525282.HMPREF0391_10735/1-7
-MIKDLQL
>887929.HMP0721_0601/1-7
-MIRNLQL
>879308.HMPREF9130_1404/1-7
-MLRNLQL
>509191.AcelC_020100022342/1-7
-MIRDLQL
>645512.GCWU000246_00928/1-8
FKSMDLQF
>584708.Apau_1464/1-8
KRILDLQF
>525903.Taci_0896/1-8
SFVFDIQF
>1009370.ALO_08028/1-5
---FDLQL
>866776.HMPREF9321_1516/1-5
---FDLQL
>546273.VEIDISOL_00811/1-5
---FDLQL
>879309.HMPREF9199_1258/1-5
---FDLQL
>479436.Vpar_1215/1-5
---FDLQL
>457405.FSDG_00832/1-8
QFLFNIQL
>546275.FUSPEROL_01933/1-8
QFLLNIQL
>469606.FSCG_00610/1-8
QFLFNIQL
>190304.FN1119/1-8
QFLFNIQL
>393480.FNP_0673/1-8
QFLFNIQL
>469617.FUAG_01035/1-8
QFTLNIQL
>469618.FVAG_02360/1-8
QFTLNIQL
>469616.FMAG_02109/1-8
QFTLNIQL
>556263.FSEG_00518/1-8
KFILNIQL
>469615.FGAG_01563/1-8
KFILNIQL
>519441.Smon_0499/1-8
ILKLNLQL
>526218.Sterm_2651/1-8
LLKLNLQL
>596323.HMPREF0554_2118/1-8
ILKLNLQL
>634994.GCWU000323_00656/1-8
LLKLNLQL
>523794.Lebu_1131/1-8
LLKLNLQL
>592015.HMPREF1705_00792/1-8
MIRFDIQL

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